species:   Scscl
pid:       PID0075
parent:    SS-milR-C29
paralog:   b
locus:     Supercontig_2.12:517775-517868
matures:   ['UAGAUCAAGUAGAAUAUAGGUA', 'CUGGUAUUCACUUGGAAGU']
srr:       SRR189065
genome:    /Users/jax/+Genomes/Fungal_genomes/Scscl.sclerotinia_sclerotiorum_2_supercontigs.fa
alignment: /media/data/njohnson/+SeqLibraries/FunHP_libraries/Zhou2012-iu.SRR189065.cram
call:      samtools view /media/data/njohnson/+SeqLibraries/FunHP_libraries/Zhou2012-iu.SRR189065.cram Supercontig_2.12:517775-517868

0 out of bounds
0 alignments
0 proper strand
0 stranded perfect matches

                              *********************         ************************          
CUGGUUGGUAGUUAUGGGUUAAGGCUUUAUCACUGGUAUUCACUUGGAAGUGAAGUCGUUACUAGAUCAAGUAGAAUAUAGGUAAACUAAUUGA
..(((((((......((((....))))....(((.((((((((((((.(((((.....)))))...)))))).)))))).)))..)))))))..
--------------------------------------------------------------UAGAUCAAGUAGAAUAUAGGUA---------- l=22 a=0 c
--------------------------------CUGGUAUUCACUUGGAAGU------------------------------------------- l=19 a=0 c*
--------------------------------------------------------------UAGAUCAAGUAGAAUAUAGGUA---------- l=22 a=0 ma
--------------------------------CUGGUAUUCACUUGGAAGU------------------------------------------- l=19 a=0 ma*


No alignments to locus

mb-01011
ax-1011011
ku-01
ss-000110011100
fn-001
